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BaseInfo

ncRNA ID novel_gma_miR5741
Species Glycine max
Class miRNA
Genome position Chr18:2118052-2118123 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 24
Mature sequence(if miRNA) 1 - AAUUUUUAAGACUUACGGAUCAAU - 24
Stem-loop(if miRNA) --                       UCC  AA    U
  AAUUUUUAAGACUUACGGAUCAA   GU  GUCU U
  |||||||||||||||||||||||   ||  |||| U
  UUAAAAAUUCUGAAUGCCUAGUU   CA  UAGA A
AA                       ---  AC    C
Stem-loop sequence AAUUUUUAAGACUUACGGAUCAAUCCGUAAGUCUUUUACAGAUCAACUUGAUCCGUAAGUCUUAAAAAUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   UAACUAGGCAUUCAGAAUUUUUAA   1
  *||||||||||||||||||||||*
targets:467   CUUGAUCCGUAAGUCUUAAAAAUC   490

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UAACUAGGCAUUCAGAAUUUUUAA   1
  *||||||||||||||||||||||*
targets:1062   CUUGAUCCGUAAGUCUUAAAAAUC   1085

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget