ncRNA ID | novel_gma_miR5739 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:41517129-41517253 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835765;SRR1451610 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AAGUGUUGCUAACAGAGUUUA - 21 |
Stem-loop(if miRNA) |
--      U              -      U C            -C   CUACUCUCUCUCU   AAGUGU GCUAACAGAGUUUA UUGGCA U UGUCCACCUCCA  UUC             C   |||||| |||||||||||||| |||||| | ||||||||||||  |||             U   UUCACA CGGUUGUCUCGAGU AACUGU A ACGGGUGGAGGU  AAG             C GU      U              C      C U            AU   UACCCAUCUCUCU |
Stem-loop sequence | AAGUGUUGCUAACAGAGUUUAUUGGCAUUCUGUCCACCUCCACUUCCUACUCUCUCUCUCUCUCUCUCUACCCAUGAAUAUGGAGGUGGGCAUACUGUCAACUGAGCUCUGUUGGCUACACUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003550641.3 |
|
3.0 | PREDICTED: Glycine max formin-like protein 13 (LOC100799319), transcript variant X1, mRNA | formin-like protein 13(LOC100799319) | coding protein | psRNATarget | |||||||||
XM_006600482.2 |
|
3.0 | PREDICTED: Glycine max formin-like protein 13 (LOC100799319), transcript variant X2, mRNA | formin-like protein 13(LOC100799319) | coding protein | psRNATarget |