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BaseInfo

ncRNA ID novel_gma_miR5734
Species Glycine max
Class miRNA
Genome position Chr6:23455854-23455900 [+]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 23
Mature sequence(if miRNA) 1 - AAGACACAAUGCUCUGAUAGGAU - 23
Stem-loop(if miRNA) --      CA      UG  A GA
  AAGACA  AUGCUC  AU G  U
  ||||||  ||||||  || |  G
  UUUUGU  UACGGG  UA C  U
GU      -A      GU  - AG
Stem-loop sequence AAGACACAAUGCUCUGAUAGGAUGUGACAUUGGGGCAUAUGUUUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541462.3
ncRNA:23   UAGGAUAGUCUCGUAACACAGAA   1
  =**||=|*||||||||||||||*
targets:704   GAACUGUGAGAGCAUUGUGUCUC   726

3.0 PREDICTED: Glycine max uncharacterized LOC100775313 (LOC100775313), mRNA uncharacterized LOC100775313(LOC100775313) coding protein psRNATarget
XM_003553851.3
ncRNA:23   UAGGAUAGUCUCGUAACACAGAA   1
  =**||=|*||||||||||||||*
targets:748   GAACUGUGAGAGCAUUGUGUCUC   770

3.0 PREDICTED: Glycine max uncharacterized LOC100819460 (LOC100819460), mRNA uncharacterized LOC100819460(LOC100819460) coding protein psRNATarget