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BaseInfo

ncRNA ID novel_gma_miR5733
Species Glycine max
Class miRNA
Genome position Chr17:2904315-2904371 [+]
Reference genome Glycine_max_v2.0
Source SRR835765;SRR835770
Length 24
Mature sequence(if miRNA) 1 - AAUUGAUUUUUAAGACUUACGGAU - 24
Stem-loop(if miRNA) --AA                       A
    UUGAUUUUUAAGACUUACGGAUC A
    ||||||||||||||||||||||| C
    AACUAAAAAUUCUGAAUGUCUAG U
AUUC                       U
Stem-loop sequence AAUUGAUUUUUAAGACUUACGGAUCAACUUGAUCUGUAAGUCUUAAAAAUCAACUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   UAGGCAUUCAGAAUUUUUAGUUAA   1
  ||||||||||||||||||||||*|
targets:471   AUCCGUAAGUCUUAAAAAUCAACU   494

1.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   UAGGCAUUCAGAAUUUUUAGUUAA   1
  ||||||||||||||||||||||*|
targets:1066   AUCCGUAAGUCUUAAAAAUCAACU   1089

1.5 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget