ncRNA ID | novel_gma_miR5731 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr16:36121-36249 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835765 |
Length | 23 |
Mature sequence(if miRNA) | 107 - UCAACUUGAUCCGGAAGAUGCUU - 129 |
Stem-loop(if miRNA) |
--    G                   A                     U         A     U   GUAU UUCCGGAUCAAGUUGAUCC GAAGAUGUUUACGGAUCAAGU GAUCCGUAA CUAUU G   |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||   CGUA AAGGCCUAGUUCAACUAGG CUUUUACGAAUGCCUAGUUCA CUAGGCAUU GAUGA U UU    G                   C                     -         C     U |
Stem-loop sequence | GUAUGUUCCGGAUCAAGUUGAUCCAGAAGAUGUUUACGGAUCAAGUUGAUCCGUAAACUAUUUGUUAGUAGCUUACGGAUCACUUGAUCCGUAAGCAUUUUCCGGAUCAACUUGAUCCGGAAGAUGCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
3.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |