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BaseInfo

ncRNA ID novel_gma_miR5726
Species Glycine max
Class miRNA
Genome position Chr15:41502932-41503048 [-]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 24
Mature sequence(if miRNA) 94 - AGAUUGUAGACAUUCUAAGAUGGU - 117
Stem-loop(if miRNA) --   -UU  A            U       - G       G      ----A     C  U
  AGA   GU GACAUUCUAAGA GGUUUUU U GAAAAUC UCUUAG     AUUUU AA U
  |||   || |||||||||||| ||||||| | ||||||| ||||||     ||||| ||
  UCU   CA CUGUAAGAUUCU CCAAAAG G UUUUUAG AGAAUC     UAAAA UU U
AA   UUU  -            U       U G       G      AUGCA     U  U
Stem-loop sequence AGAUUGUAGACAUUCUAAGAUGGUUUUUUGGAAAAUCGUCUUAGAAUUUUCAAUUUUUUUAAAAUACGUACUAAGAGGAUUUUUGGUGAAAACCUUCUUAGAAUGUCACUUUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003518405.3
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|||||||=||||||||||||
targets:1347   UGUGUCUUAGAGUGUCUACAAUCU   1370

1.5 PREDICTED: Glycine max protein FAM91A1-like (LOC100802520), mRNA protein FAM91A1-like(LOC100802520) coding protein psRNATarget
XM_006593829.2
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:964   UGUGUAUUAGAAUGUCUACAAUCA   987

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X8, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_014766399.1
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1148   UGUGUAUUAGAAUGUCUACAAUCA   1171

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X7, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593826.2
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1577   UGUGUAUUAGAAUGUCUACAAUCA   1600

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X4, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593828.2
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1300   UGUGUAUUAGAAUGUCUACAAUCA   1323

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X6, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_006593827.2
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1311   UGUGUAUUAGAAUGUCUACAAUCA   1334

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X5, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_003556887.3
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1582   UGUGUAUUAGAAUGUCUACAAUCA   1605

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100813099), transcript variant X2, mRNA protein FAM91A1-like(LOC100813099) coding protein psRNATarget
XM_014766398.1
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1577   UGUGUAUUAGAAUGUCUACAAUCA   1600

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X1, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget
XM_003541223.3
ncRNA:24   UGGUAGAAUCUUACAGAUGUUAGA   1
  **==|*|||||||||||||||||*
targets:1592   UGUGUAUUAGAAUGUCUACAAUCA   1615

2.0 PREDICTED: Glycine max protein FAM91A1-like (LOC100799939), transcript variant X2, mRNA protein FAM91A1-like(LOC100799939) coding protein psRNATarget