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BaseInfo

ncRNA ID novel_gma_miR5708
Species Glycine max
Class miRNA
Genome position Chr12:34933724-34933798 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 24
Mature sequence(if miRNA) 52 - AUCAAGUUGAUUCGUAGGAGGAAA - 75
Stem-loop(if miRNA) --                              --C  U
  UCCUCUUACGGAUCAACUUGAUCUGUAAGU   UC U
  ||||||||||||||||||||||||||||||   || A
  AGGAGGAUGCUUAGUUGAACUAGGCAUUCA   AG C
AA                              ACU  G
Stem-loop sequence UCCUCUUACGGAUCAACUUGAUCUGUAAGUCUCUUACGGAUCAACUUACGGAUCAAGUUGAUUCGUAGGAGGAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006574797.2
ncRNA:24   AAAGGAGGAUGCUUAGUUGAACUA   1
  ***==||=|==|||||||||||||
targets:2216   AAGUUUCUUGUGAAUCAACUUGAU   2239

3.0 PREDICTED: Glycine max uncharacterized LOC100791584 (LOC100791584), transcript variant X1, mRNA uncharacterized LOC100791584(LOC100791584) coding protein psRNATarget