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BaseInfo

ncRNA ID novel_gma_miR5707
Species Glycine max
Class miRNA
Genome position Chr12:11799356-11799401 [+]
Reference genome Glycine_max_v2.0
Source SRR835765
Length 22
Mature sequence(if miRNA) 25 - UUAGUGGUAGGAUUUUCUGGAC - 46
Stem-loop(if miRNA) --        ---G       UUA
  UCAGAAGA    ACCAUUA   A
  ||||||||    |||||||   U
  GGUCUUUU    UGGUGAU   A
CA        AGGA       UCU
Stem-loop sequence UCAGAAGAGACCAUUAUUAAUAUCUUAGUGGUAGGAUUUUCUGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006596777.1
ncRNA:22   CAGGUCUUUUAGGAUGGUGAUU   1
  *|=|||||=|||||*|||||||
targets:100   AUUCAGAAGAUCCUUCCACUAA   121

2.5 PREDICTED: Glycine max uncharacterized LOC102666655 (LOC102666655), mRNA uncharacterized LOC102666655(LOC102666655) coding protein psRNATarget
XM_006598336.1
ncRNA:22   CAGGUCUUUUAGGAUGGUGAUU   1
  *|=||||=|||||||||||*||
targets:28   AUUCAGAGAAUCCUACCACAAA   49

2.5 PREDICTED: Glycine max uncharacterized LOC102659789 (LOC102659789), mRNA uncharacterized LOC102659789(LOC102659789) coding protein psRNATarget