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BaseInfo

ncRNA ID novel_gma_miR5690
Species Glycine max
Class miRNA
Genome position Chr8:42076922-42077000 [-]
Reference genome Glycine_max_v2.0
Source SRR835763;SRR835766;SRR835767;SRR835768;SRR835772;SRR835773
Length 21
Mature sequence(if miRNA) 1 - UUGAAAAUGUUUAAGGAUUGA - 21
Stem-loop(if miRNA) --                         A   --     AAU
  AGUCCUUAAACAUUUUCAAAGUAUG UGA  AAGUU   C
  ||||||||||||||||||||||||| |||  |||||
  UUAGGAAUUUGUAAAAGUUUCGUAU AUU  UUCGG   G
AG                         -   AA     GGA
Stem-loop sequence AGUCCUUAAACAUUUUCAAAGUAUGAUGAAAGUUAAUCGAGGGGCUUAAUUAUAUGCUUUGAAAAUGUUUAAGGAUUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014767429.1
ncRNA:21   AGUUAGGAAUUUGUAAAAGUU   1
  |*|||=|||*|||||||||||
targets:347   UGAAUUCUUUAACAUUUUCAA   367

2.5 PREDICTED: Glycine max uncharacterized LOC100784469 (LOC100784469), transcript variant X1, mRNA uncharacterized LOC100784469(LOC100784469) coding protein psRNATarget
XM_006603172.1
ncRNA:21   AGUUAGGAAUUUGUAAAAGUU   1
  ||||*|*|||||||||||||*
targets:976   UCAAGCAUUAAACAUUUUCAC   996

3.0 PREDICTED: Glycine max uncharacterized LOC100778101 (LOC100778101), mRNA uncharacterized LOC100778101(LOC100778101) coding protein psRNATarget