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BaseInfo

ncRNA ID novel_gma_miR5683
Species Glycine max
Class miRNA
Genome position Chr6:43540300-43540350 [-]
Reference genome Glycine_max_v2.0
Source SRR835763
Length 24
Mature sequence(if miRNA) 28 - AAAAUACAUUCUAAGACGGUUCUC - 51
Stem-loop(if miRNA) --      C              CU
  AAAAUA AUUCUAAGACGGUU  C
  |||||| ||||||||||||||  U
  UUUUAU UAAGAUUCUGCUAA  G
UU      A              AA
Stem-loop sequence AAAAUACAUUCUAAGACGGUUCUCUGAAAAUCGUCUUAGAAUAUAUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003541636.3
ncRNA:24   CUCUUGGCAGAAUCUUACAUAAAA   1
  |****|=||=||||||||||||||
targets:2800   GUAUUCUGUUUUAGAAUGUAUUUU   2823

2.0 PREDICTED: Glycine max dynamin-related protein 4C-like (LOC100797278), mRNA dynamin-related protein 4C-like(LOC100797278) coding protein psRNATarget
XM_014771087.1
ncRNA:24   CUCUUGGCAGAAUCUUACAUAAAA   1
  *|*||||||||||||||||||*|*
targets:2534   AAAAACCGUCUUAGAAUGUAUAUA   2557

2.5 PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA uncharacterized LOC102664939(LOC102664939) coding protein psRNATarget