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BaseInfo

ncRNA ID	novel_gma_miR5679
Species	Glycine max
Class	miRNA
Genome position	Chr4:49476619-49476694 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835763;SRR1451610
Length	21
Mature sequence(if miRNA)	56 - UGUGAAUGAAGCAGGAGAUAU - 76
Stem-loop(if miRNA)	--    G   AC          A   AGAAUAGUGAUU   AUCU CUG  UCAUUCAUAC CAC            C   |||| |||  |||||||||| |||            A   UAGA GAC  AGUAAGUGUG UUA            A UA    G   GA          -   AUGGAAUCGUUA
Stem-loop sequence	AUCUGCUGACUCAUUCAUACACACAGAAUAGUGAUUCAAAUUGCUAAGGUAAUUGUGUGAAUGAAGCAGGAGAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_003556544.3	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   ***|||=|||||||||||||| targets:219   UCUUCUUCUGCUUCAUUCACA   239 Target Full Sequence	2.0	PREDICTED: Glycine max myosin-1-like (LOC100781736), transcript variant X1, mRNA	myosin-1-like(LOC100781736)	coding protein	psRNATarget
XM_014772719.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   ***|||=|||||||||||||| targets:219   UCUUCUUCUGCUUCAUUCACA   239 Target Full Sequence	2.0	PREDICTED: Glycine max myosin-1-like (LOC100781736), transcript variant X2, mRNA	myosin-1-like(LOC100781736)	coding protein	psRNATarget
AK285375.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   =|*||||||*||||||||||| targets:89   GUCUCUCCUUCUUCAUUCACA   109 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-08-F09	NA	coding protein	psRNATarget
XM_014764032.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   =|*||||||*||||||||||| targets:98   GUCUCUCCUUCUUCAUUCACA   118 Target Full Sequence	2.5	PREDICTED: Glycine max nucleolar GTP-binding protein 1 (LOC100795311), transcript variant X2, mRNA	nucleolar GTP-binding protein 1(LOC100795311)	coding protein	psRNATarget
XM_006589585.2	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   **|||||=||||||||||*|| targets:257   CAAUCUCUUGCUUCAUUCCCA   277 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100792304 (LOC100792304), transcript variant X1, mRNA	uncharacterized LOC100792304(LOC100792304)	coding protein	psRNATarget
XM_014774895.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   **||=|||||||*|||||||| targets:1832   CGAUUUCCUGCUACAUUCACA   1852 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein sll1770-like (LOC100801705), transcript variant X2, mRNA	uncharacterized protein sll1770-like(LOC100801705)	coding protein	psRNATarget
AK244107.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   **||=|||||||*|||||||| targets:1757   CGAUUUCCUGCUACAUUCACA   1777 Target Full Sequence	2.5	Glycine max cDNA, clone: GMFL01-02-B20	NA	coding protein	psRNATarget
XM_006578758.1	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   **||=|||||||*|||||||| targets:1832   CGAUUUCCUGCUACAUUCACA   1852 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein sll1770-like (LOC100801705), transcript variant X1, mRNA	uncharacterized protein sll1770-like(LOC100801705)	coding protein	psRNATarget
XM_003526775.3	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   **||=|||||||*|||||||| targets:1924   CGAUUUCCUGCUACAUUCACA   1944 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized protein sll1770 (LOC100791330), mRNA	uncharacterized protein sll1770(LOC100791330)	coding protein	psRNATarget
XM_003520876.3	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   *|*|||=|||||||||||||* targets:123   UUCUCUUCUGCUUCAUUCACC   143 Target Full Sequence	3.0	PREDICTED: Glycine max E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8-like (LOC100802736), mRNA	E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8-like(LOC100802736)	coding protein	psRNATarget
XM_003545169.3	ncRNA:21   UAUAGAGGACGAAGUAAGUGU   1   *|*||||=||||||||||||* targets:346   UUCUCUCUUGCUUCAUUCACU   366 Target Full Sequence	3.0	PREDICTED: Glycine max probably inactive leucine-rich repeat receptor-like protein kinase IMK2 (LOC100811174), mRNA	probably inactive leucine-rich repeat receptor-like protein kinase IMK2(LOC100811174)	coding protein	psRNATarget