ncRNA ID | novel_gma_miR5677 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr4:8165983-8166059 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835763;SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 54 - AAUUUUUAAGACUUACGGAUCAAC - 77 |
Stem-loop(if miRNA) |
--A          C           C                AUUUUUAAGA UUACGGAUCAA UUGAUCUGUAAGU    |||||||||| ||||||||||| ||||||||||||U    UAAAAAUUCU AAUGCUUAGUU AACUAGGCAUUUU AAC          A           C             |
Stem-loop sequence | AAUUUUUAAGACUUACGGAUCAACUUGAUCUGUAAGUUUUUUACGGAUCAACUUGAUUCGUAAAUCUUAAAAAUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_003547498.3 |
|
1.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget | |||||||||
XM_014768353.1 |
|
1.0 | PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA | CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) | coding protein | psRNATarget |