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BaseInfo

ncRNA ID novel_gma_miR5675
Species Glycine max
Class miRNA
Genome position Chr3:31356835-31356911 [-]
Reference genome Glycine_max_v2.0
Source SRR835763;SRR835765;SRR835771
Length 24
Mature sequence(if miRNA) 54 - AAUUUUUAAGACUUACGGAUCAAC - 77
Stem-loop(if miRNA) --A          C                  C    A
   AUUUUUAAGA UUACGGAUCAACUUGAUC GUAA U
   |||||||||| |||||||||||||||||| |||| U
   UAAAAAUUUU AAUGCCUAGUUGAACUAG CAUU U
AAC          U                  A    U
Stem-loop sequence AAUUUUUAAGACUUACGGAUCAACUUGAUCCGUAAAUUUUUUACAGAUCAAGUUGAUCCGUAAUUUUUAAAAAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003547498.3
ncRNA:24   CAACUAGGCAUUCAGAAUUUUUAA   1
  *||||||||||||||||||||||*
targets:467   CUUGAUCCGUAAGUCUUAAAAAUC   490

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X1, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget
XM_014768353.1
ncRNA:24   CAACUAGGCAUUCAGAAUUUUUAA   1
  *||||||||||||||||||||||*
targets:1062   CUUGAUCCGUAAGUCUUAAAAAUC   1085

1.0 PREDICTED: Glycine max CBL-interacting serine/threonine-protein kinase 1-like (LOC100780524), transcript variant X2, mRNA CBL-interacting serine/threonine-protein kinase 1-like(LOC100780524) coding protein psRNATarget