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BaseInfo

ncRNA ID novel_gma_miR5668
Species Glycine max
Class miRNA
Genome position Chr2:42957424-42957553 [+]
Reference genome Glycine_max_v2.0
Source SRR835763
Length 21
Mature sequence(if miRNA) 1 - UGAUUGGUUGAAAUUUAUUAA - 21
Stem-loop(if miRNA) --                         -          GC   UU  ACAACU  A     GAUAUAG
  UGAUUGGUUGAAAUUUAUUAAAAAU AUCAAUUUUG  AUG  UC      UA AUCAG       A
  ||||||||||||||||||||||||| ||||||||||  |||  ||      || |||||
  ACUAACCAACUUUAAAUAAUUUUUA UAGUUAAAAC  UAC  AG      AU UAGUC       A
AC                         G          --   CC  ---GAU  A     AAUUACU
Stem-loop sequence UGAUUGGUUGAAAUUUAUUAAAAAUAUCAAUUUUGGCAUGUUUCACAACUUAAAUCAGGAUAUAGAAUCAUUAACUGAUAUAUAGGACCCAUCAAAAUUGAUGAUUUUUAAUAAAUUUCAACCAAUCACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003543086.3
ncRNA:21   AAUUAUUUAAAGUUGGUUAGU   1
  ||||||*|||||||||||*||
targets:1722   UUAAUAUAUUUCAACCAACCA   1742

2.5 PREDICTED: Glycine max anthocyanidin 3-O-glucosyltransferase 7-like (LOC100807224), mRNA anthocyanidin 3-O-glucosyltransferase 7-like(LOC100807224) coding protein psRNATarget