ncRNA ID | novel_gma_miR5662 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:5966950-5967071 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835763 |
Length | 21 |
Mature sequence(if miRNA) | 1 - CUGAGCAUUCUAAGACGGCCA - 21 |
Stem-loop(if miRNA) |
- A        A            U      C  UCC  U           UC      UGU  G CUGUCUUA AAUGCUCAGCAU CUACAU GG   UG AGUUGUGACCG  AUAGAA   U  | |||||||| |||||||||||| |||||| ||   || |||||||||||  ||||||   G  C GGCAGAAU UUACGAGUCGUA GAUGUA CU   AC UCAACACUGGC  UAUCUU   C A C        C            C      A  ---  -           GA      UUA |
Stem-loop sequence | GACUGUCUUAAAAUGCUCAGCAUUCUACAUCGGUCCUGUAGUUGUGACCGUCAUAGAAUGUUGCAUUUUCUAUAGCGGUCACAACUCAUCAAUGUAGCAUGCUGAGCAUUCUAAGACGGCCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT092784.1 |
|
3.0 | Soybean clone JCVI-FLGm-11B10 unknown mRNA | NA | coding protein | psRNATarget | |||||||||
XM_003529393.3 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC100527894 (LOC100527894), mRNA | uncharacterized LOC100527894(LOC100527894) | coding protein | psRNATarget |