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BaseInfo

ncRNA ID novel_gma_miR5659
Species Glycine max
Class miRNA
Genome position Chr20:11991101-11991174 [-]
Reference genome Glycine_max_v2.0
Source SRR835763
Length 21
Mature sequence(if miRNA) 54 - UAAGACGGUUCUCUAAAAAAU - 74
Stem-loop(if miRNA) --          -C         -U    G      AU
  UAAGACGGUU  UCUAAAAAA  UAUU UAGAAU  A
  ||||||||||  |||||||||  |||| ||||||
  AUUCUGCUAA  AGAUUUUUU  AUAA AUCUUA  G
AA          AA         UU    A      CA
Stem-loop sequence UAAGACGGUUCUCUAAAAAAUUAUUGUAGAAUAUAGACAUUCUAAAAUAUUUUUUUUAGAAAAAUCGUCUUAAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763138.1
ncRNA:21   UAAAAAAUCUCUUGGCAGAAU   1
  =||||||||||||||||||||
targets:1424   GUUUUUUAGAGAACCGUCUUA   1444

0.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X3, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget
XM_006589010.2
ncRNA:21   UAAAAAAUCUCUUGGCAGAAU   1
  =||||||||||||||||||||
targets:2133   GUUUUUUAGAGAACCGUCUUA   2153

0.0 PREDICTED: Glycine max uncharacterized LOC100806242 (LOC100806242), transcript variant X2, mRNA uncharacterized LOC100806242(LOC100806242) coding protein psRNATarget