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BaseInfo

ncRNA ID novel_gma_miR5658
Species Glycine max
Class miRNA
Genome position Chr19:39345866-39345960 [+]
Reference genome Glycine_max_v2.0
Source SRR835763
Length 24
Mature sequence(if miRNA) 72 - AUAUUUUGUAGUUUGAUUCGGUUU - 95
Stem-loop(if miRNA) --C     C      U         --ACG           UU    AA
   UCGAA CAAAUU AUAAAAUAU     UGGUUUGAUUU  AUUU  A
   ||||| |||||| |||||||||     |||||||||||  ||||
   GGCUU GUUUGA UGUUUUAUA     AUUAAACUAAA  UAAA  A
UUU     A      -         AUCAA           UU    AU
Stem-loop sequence CUCGAACCAAAUUUAUAAAAUAUACGUGGUUUGAUUUUUAUUUAAAAUAAAAUUUAAAUCAAAUUAAACUAAUAUUUUGUAGUUUGAUUCGGUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770559.1
ncRNA:24   UUUGGCUUAGUUUGAUGUUUUAUA   1
  |||=*||||**|||||||||||||
targets:9   AAAUAGAAUGCAACUACAAAAUAU   32

2.0 PREDICTED: Glycine max uncharacterized LOC106796908 (LOC106796908), mRNA uncharacterized LOC106796908(LOC106796908) coding protein psRNATarget