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BaseInfo

ncRNA ID gba-miR7489a
Species Gossypium barbadense
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AUUGUUGCCAAUGUAGGAGGACA - NA
Stem-loop(if miRNA) CUC    CCGC         UG           A  G  A   A          ACUG  UCGACAUGUAUCAUCUUAUUAUUAAUUGAUGAUGCAUGAGACAUCAAAUAUAAAUAUUAUACAAAUUUGUAAUAUUAAAAAUCACAAAAAUAAAUCGAAUAUUUGCAUUAUUAUCCAAUAAUAUAACUACUAAUAAAAGCGAUUCACGGGAAAGAGCACGUU
   GAAC    GUCCUCCUG  UUGGCAACAGU CU AU CCA UUAAGCUAAG    AA                                                                                                                                                                  A
   ||||    |||||||||  ||||||||||| || || ||| ||||||||||    ||                                                                                                                                                                  G
   CUUG    CAGGAGGAU  AACCGUUGUUA GG UA GGU AGUUCGAUUU    CG                                                                                                                                                                  G
GAA    AAUA         GU           C  G  C   C          -AGC  AAAGUUACGAUAAAAAAAUUAGUUUGUAUAUUCUAAAUAAUAAUUAAAAUCAGGAUAUCGAUUUUAUUAAUUAGGAUUUUUAGUCUUAAUAAAUAAAAGGCACAUAGGUUUACUUACUACCUAUUCGGGUUUACCUUAUUUACACUGAAAUUCUGUUCAAUG
Stem-loop sequence CUCGAACCCGCGUCCUCCUGUGUUGGCAACAGUACUGAUACCAAUUAAGCUAAGACUGAAUCGACAUGUAUCAUCUUAUUAUUAAUUGAUGAUGCAUGAGACAUCAAAUAUAAAUAUUAUACAAAUUUGUAAUAUUAAAAAUCACAAAAAUAAAUCGAAUAUUUGCAUUAUUAUCCAAUAAUAUAACUACUAAUAAAAGCGAUUCACGGGAAAGAGCACGUUAGGGUAACUUGUCUUAAAGUCACAUUUAUUCCAUUUGGGCUUAUCCAUCAUUCAUUUGGAUACACGGAAAAUAAAUAAUUCUGAUUUUUAGGAUUAAUUAUUUUAGCUAUAGGACUAAAAUUAAUAAUAAAUCUUAUAUGUUUGAUUAAAAAAAUAGCAUUGAAAGCCGAUUUAGCUUGACUGGCAUGGGCAUUGUUGCCAAUGUAGGAGGACAUAAGUUCAAG