ncRNA ID | gba-miR7489a |
Species | Gossypium barbadense |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - AUUGUUGCCAAUGUAGGAGGACA - NA |
Stem-loop(if miRNA) |
CUC    CCGC         UG           A  G  A   A          ACUG  UCGACAUGUAUCAUCUUAUUAUUAAUUGAUGAUGCAUGAGACAUCAAAUAUAAAUAUUAUACAAAUUUGUAAUAUUAAAAAUCACAAAAAUAAAUCGAAUAUUUGCAUUAUUAUCCAAUAAUAUAACUACUAAUAAAAGCGAUUCACGGGAAAGAGCACGUU    GAAC    GUCCUCCUG  UUGGCAACAGU CU AU CCA UUAAGCUAAG    AA                                                                                                                                                                  A    ||||    |||||||||  ||||||||||| || || ||| ||||||||||    ||                                                                                                                                                                  G    CUUG    CAGGAGGAU  AACCGUUGUUA GG UA GGU AGUUCGAUUU    CG                                                                                                                                                                  G GAA    AAUA         GU           C  G  C   C          -AGC  AAAGUUACGAUAAAAAAAUUAGUUUGUAUAUUCUAAAUAAUAAUUAAAAUCAGGAUAUCGAUUUUAUUAAUUAGGAUUUUUAGUCUUAAUAAAUAAAAGGCACAUAGGUUUACUUACUACCUAUUCGGGUUUACCUUAUUUACACUGAAAUUCUGUUCAAUG |
Stem-loop sequence | CUCGAACCCGCGUCCUCCUGUGUUGGCAACAGUACUGAUACCAAUUAAGCUAAGACUGAAUCGACAUGUAUCAUCUUAUUAUUAAUUGAUGAUGCAUGAGACAUCAAAUAUAAAUAUUAUACAAAUUUGUAAUAUUAAAAAUCACAAAAAUAAAUCGAAUAUUUGCAUUAUUAUCCAAUAAUAUAACUACUAAUAAAAGCGAUUCACGGGAAAGAGCACGUUAGGGUAACUUGUCUUAAAGUCACAUUUAUUCCAUUUGGGCUUAUCCAUCAUUCAUUUGGAUACACGGAAAAUAAAUAAUUCUGAUUUUUAGGAUUAAUUAUUUUAGCUAUAGGACUAAAAUUAAUAAUAAAUCUUAUAUGUUUGAUUAAAAAAAUAGCAUUGAAAGCCGAUUUAGCUUGACUGGCAUGGGCAUUGUUGCCAAUGUAGGAGGACAUAAGUUCAAG |