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BaseInfo

ncRNA ID novel_gma_miR5642
Species Glycine max
Class miRNA
Genome position Chr1:38707180-38707288 [+]
Reference genome Glycine_max_v2.0
Source SRR835763;SRR835770
Length 22
Mature sequence(if miRNA) 1 - UUGCUGGAGUCGGUGUCACCAU - 22
Stem-loop(if miRNA) --       A     -  UC  ----CA   ---A   AUACUUU   UC    CCAC  A
  UUGCUGG GUCGG UG  AC      UCA    GCA       GGA  GGCU    GG C
  ||||||| ||||| ||  ||      |||    |||       |||  ||||    ||
  AACGACC CAGUC AC  UG      AGU    CGU       CCU  UCGA    CC U
UA       -     G  GA  UUAAAA   CCUC   ---CCCU   UC    -CAC  U
Stem-loop sequence UUGCUGGAGUCGGUGUCACCAUCAAGCAAUACUUUGGAUCGGCUCCACGGACUUCCCACAGCUCUUCCUCCCUGCCUCCUGAAAAAUUGUAGCAGCUGACCCAGCAAAU