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BaseInfo

ncRNA ID novel_gma_miR5641
Species Glycine max
Class miRNA
Genome position Chr1:33345511-33345559 [-]
Reference genome Glycine_max_v2.0
Source SRR1295517;SRR1295521;SRR1295524;SRR1295525;SRR1295531;SRR1451607
Length 24
Mature sequence(if miRNA) 26 - AGGAACACAAUGCUCUGAUAGGAU - 49
Stem-loop(if miRNA) --      A A          A GA
  AGGAAC C AUGCUCUGAU G  U
  |||||| | |||||||||| |  G
  UCUUUG G UAUGGGAUUA C  U
CA      - A          - AG
Stem-loop sequence AGGAACACAAUGCUCUGAUAGGAUGUGACAUUAGGGUAUAGGUUUCUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003519029.3
ncRNA:24   UAGGAUAGUCUCGUAACACAAGGA   1
  =||--||=|||||||||||||=||
targets:1091   GUC--AUUAGAGCAUUGUGUUUCU   1112

2.5 PREDICTED: Glycine max transcription initiation factor IIB-like (LOC100790355), mRNA transcription initiation factor IIB-like(LOC100790355) coding protein psRNATarget