ncRNA ID | novel_gma_miR5639 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr15:21835858-21836004 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835763 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGUUAUUUGAAAAUCGAUGUCGUU - 24 |
Stem-loop(if miRNA) |
-- G            C            A                                      CACAC   G UUAUUUGAAAAU GAUGUCGUUAAG AUUUACAACAUCGGUUUUCAAAUAACCAAUGUUAAAAU     U   | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||     A   C AAUAAACUUUUA CUACAGCAAUUC UGAAUGUUGUAGCUAAAAGUUUAUUGGUUACAAUUUUG     A AG A            A            G                                      ACUUA |
Stem-loop sequence | GGUUAUUUGAAAAUCGAUGUCGUUAAGAAUUUACAACAUCGGUUUUCAAAUAACCAAUGUUAAAAUCACACUAAAUUCAGUUUUAACAUUGGUUAUUUGAAAAUCGAUGUUGUAAGUGCUUAACGACAUCAAUUUUCAAAUAAACGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014776578.1 |
|
2.0 | PREDICTED: Glycine max ankyrin repeat and SOCS box protein 7-like (LOC100786031), transcript variant X1, mRNA | ankyrin repeat and SOCS box protein 7-like(LOC100786031) | coding protein | psRNATarget | |||||||||
BT098520.1 |
|
2.5 | Soybean clone JCVI-FLGm-16L17 unknown mRNA | NA | coding protein | psRNATarget |