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BaseInfo

ncRNA ID novel_gma_miR5635
Species Glycine max
Class miRNA
Genome position Chr14:29333518-29333627 [+]
Reference genome Glycine_max_v2.0
Source SRR835763
Length 24
Mature sequence(if miRNA) 1 - UUAAAUCUGAAUCAAGCUUGUCAU - 24
Stem-loop(if miRNA) --UUAA       UC        -     UCUU   U      ---CAUAU   G  A
      AUCUGAA  AAGCUUGU CAUGA    GUG CAUAGU        UCA AC U
      |||||||  |||||||| |||||    ||| ||||||        ||| ||
      UAGAUUU  UUUGAAUA GUACU    CAC GUGUUA        GGU UG G
UUAAAA       -U        A     -UUU   U      CCCCACCU   G  U
Stem-loop sequence UUAAAUCUGAAUCAAGCUUGUCAUGAUCUUGUGUCAUAGUCAUAUUCAGACAUGUGUGUGGUCCACCCCAUUGUGUCACUUUUCAUGAAUAAGUUUUUUUAGAUAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014775058.1
ncRNA:24   UACUGUUCGAACUAAGUCUAAAUU   1
  |*||*|||||||||||||||||||
targets:155   ACGAAAAGCUUGAUUCAGAUUUAA   178

0.0 PREDICTED: Glycine max uncharacterized LOC106798469 (LOC106798469), mRNA uncharacterized LOC106798469(LOC106798469) coding protein psRNATarget
XM_014767726.1
ncRNA:24   UACUGUUCGAACUAAGUCUAAAUU   1
  ||||*||||||||||||*||||||
targets:15   AUGAGAAGCUUGAUUCAAAUUUAA   38

1.5 PREDICTED: Glycine max uncharacterized LOC106796154 (LOC106796154), mRNA uncharacterized LOC106796154(LOC106796154) coding protein psRNATarget
XM_014766207.1
ncRNA:24   UACUGUUCGAACUAAGUCUAAAUU   1
  ||||*||||||||||||*||||||
targets:235   AUGAGAAGCUUGAUUCAAAUUUAA   258

1.5 PREDICTED: Glycine max uncharacterized LOC106795615 (LOC106795615), mRNA uncharacterized LOC106795615(LOC106795615) coding protein psRNATarget