ncRNA ID | novel_gma_miR5632 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:6371620-6371833 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517;SRR1292928 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAAACGAUGUAGAAGUUAGACCU - 24 |
Stem-loop(if miRNA) |
-AGAAA           -  A   C          GUGUUAUCAUAGAA  -     AA  U      U  CC      -GUG  CA U   G AA           UU       CGAUGUAGAAG UU GAC UUCUACAUCG              GC GAUGU  AA AGCGCU UU  ACAUCG    CU  G UAA A  UGAUGUAGAAG  A       ||||||||||| || ||| ||||||||||              || |||||  || |||||| ||  ||||||    ||  | ||| |  |||||||||||       GCUACAUCUUC AG UUG AAGAUGUAGC              UG CUACA  UU UCGCGA AA  UGUAGC    GA  C AUU U  GCUACAUCUUC  G AUUGUG           C  A   -          AAAGAACUGACUCG  A     CC  U      U  AA      AAAA  AA C   G -G           CA |
Stem-loop sequence | AGAAACGAUGUAGAAGUUAGACCUUCUACAUCGGUGUUAUCAUAGAAGCGAUGUAAAAUAGCGCUUUUCCACAUCGGUGCUCAGUUAAGAAAUGAUGUAGAAGUUAGACCUUCUACAUCGGUGUUACCAAAGAAAACGAUGUAAAAUAGCGCUUUUCCACAUCAGUGCUCAGUCAAGAAACGAUGUAGAAGUUAGACCUUCUACAUCGGUGUUA |