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BaseInfo

ncRNA ID novel_gma_miR5627
Species Glycine max
Class miRNA
Genome position Chr1:8420823-8420883 [-]
Reference genome Glycine_max_v2.0
Source SRR835763;SRR835765;SRR835767;SRR835773
Length 24
Mature sequence(if miRNA) 1 - UGGCACUAAAGGAUGACGUGACAU - 24
Stem-loop(if miRNA) --  G G    -A              -  A
  GU A GUCA  UUUUAGUGCCACGU GG C
  || | ||||  |||||||||||||| || U
  CA U CAGU  GAAAUCACGGUGCA CC A
UA  G G    AG              A  U
Stem-loop sequence GUGAGGUCAAUUUUAGUGCCACGUGGACUAUCCAACGUGGCACUAAAGGAUGACGUGACAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003538749.3
ncRNA:24   UACAGUGCAGUAGGAAAUCACGGU   1
  *|*|||||*|||*|||||||||||
targets:1442   UUUUCACGCCAUACUUUAGUGCCA   1465

2.5 PREDICTED: Glycine max subtilisin-like protease SBT1.7 (LOC100801866), mRNA subtilisin-like protease SBT1.7(LOC100801866) coding protein psRNATarget