ncRNA ID | novel_gma_miR5626 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr20:27154344-27154403 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517;SRR1295519;SRR1295521;SRR1292928;SRR1451608;SRR1451610;SRR1294476 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GGAGGAAGAAUCUGGAAGGCCU - 22 |
Stem-loop(if miRNA) |
--  GAG       G           -A  A   GC   CCAGGUU CUUCCUCCAGA  GC A   ||   ||||||| |||||||||||  ||   CG   GGUCUAA GAAGGAGGUCU  CG C UC  GAA       -           AC  C |
Stem-loop sequence | GCGAGCCAGGUUGCUUCCUCCAGAAGCAACCGCCAUCUGGAGGAAGAAUCUGGAAGGCCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014767180.1 |
|
2.0 | PREDICTED: Glycine max probable pre-mRNA-splicing factor ATP-dependent RNA helicase (LOC100790809), transcript variant X4, mRNA | probable pre-mRNA-splicing factor ATP-dependent RNA helicase(LOC100790809) | coding protein | psRNATarget |