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BaseInfo

ncRNA ID novel_gma_miR5622
Species Glycine max
Class miRNA
Genome position Chr14:12472602-12472745 [-]
Reference genome Glycine_max_v2.0
Source SRR1292925
Length 19
Mature sequence(if miRNA) 1 - GGGGUUGAGAUUUUGGAUC - 19
Stem-loop(if miRNA) --    UCU      -      --UG  UCAUUCGCAUAGCUUGUCCAUGCUACCAGGUGGUUUUUUGCAUAGAC
  UCCA   GAAUCU AACCCU    GC                                               U
  ||||   |||||| ||||||    ||
  AGGU   UUUAGA UUGGGG    AU                                               A
CU    ---      G      UUCC  CGCAACGUAAAGUACGAGGAGCAGAAUACGGGGCUGUUCAAGCAUCU
Stem-loop sequence UCCAUCUGAAUCUAACCCUUGGCUCAUUCGCAUAGCUUGUCCAUGCUACCAGGUGGUUUUUUGCAUAGACUAUCUACGAACUUGUCGGGGCAUAAGACGAGGAGCAUGAAAUGCAACGCUACCUUGGGGUUGAGAUUUUGGAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014771463.1
ncRNA:19   CUAGGUUUUAGAGUUGGGG   1
  |||||=||||||||||||=
targets:264   GAUCCGAAAUCUCAACCCU   282

2.0 PREDICTED: Glycine max uncharacterized LOC106797230 (LOC106797230), mRNA uncharacterized LOC106797230(LOC106797230) coding protein psRNATarget