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BaseInfo

ncRNA ID novel_gma_miR5610
Species Glycine max
Class miRNA
Genome position Chr6:20376069-20376150 [-]
Reference genome Glycine_max_v2.0
Source SRR835762;SRR1451605
Length 21
Mature sequence(if miRNA) 62 - GGAUGCAGCGGUUCAUCGAUC - 82
Stem-loop(if miRNA) --        C    C       UC   C  AA  -GU  U
  GGAUGCAG GGUU AUCGAUC  UUC UG  UC   UG U
  |||||||| |||| |||||||  ||| ||  ||   || U
  CCUACGUC CCAA UAGCUAG  AAG AC  AG   AC A
GA        U    A       CU   U  CA  ACU  A
Stem-loop sequence GGAUGCAGCGGUUCAUCGAUCUCUUCCUGAAUCGUUGUUUAACAUCAGAACCAUGAAUCGAUCGAUAAACCUCUGCAUCCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ242646.1
ncRNA:21   CUAGCUACUUGGCGACGUAGG   1
  |||||||*||||*||||||||
targets:71   GAUCGAUAAACCUCUGCAUCC   91

2.5 Sequence 8641 from Patent EP2985353 NA coding protein psRNATarget
JB170977.1
ncRNA:21   CUAGCUACUUGGCGACGUAGG   1
  |||||||*||||*||||||||
targets:71   GAUCGAUAAACCUCUGCAUCC   91

2.5 Sequence 8641 from Patent EP2559767 NA coding protein psRNATarget
HI410516.1
ncRNA:21   CUAGCUACUUGGCGACGUAGG   1
  |||||||*||||*||||||||
targets:71   GAUCGAUAAACCUCUGCAUCC   91

2.5 Sequence 8641 from Patent EP2074227 NA coding protein psRNATarget