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BaseInfo

ncRNA ID novel_gma_miR5607
Species Glycine max
Class miRNA
Genome position Chr19:34890326-34890412 [-]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 24
Mature sequence(if miRNA) 64 - GUAGAUAGUGUUAGGUUUUUCAAC - 87
Stem-loop(if miRNA) --     U            U         C      U  AUA
  GUAGA AGUGUUAGGUUU UCAACUUUU UACAUU GU   C
  ||||| |||||||||||| ||||||||| |||||| ||   A
  CAUCU UUACAGUCCAAA AGUUGAAAA AUGUAG CA   U
AA     U            U         A      C  AUA
Stem-loop sequence GUAGAUAGUGUUAGGUUUUUCAACUUUUCUACAUUUGUAUACAUAUAACCGAUGUAAAAAAGUUGAUAAACCUGACAUUUUCUACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006600762.2
ncRNA:22   ACUUUUUGGAUUGUGAUAGAUG   1
  *|=|||||*|||||||||||=|
targets:1   CGGAAAACAUAACACUAUCUGC   22

2.5 PREDICTED: Glycine max elongation factor G-1, chloroplastic-like (LOC100797377), mRNA elongation factor G-1, chloroplastic-like(LOC100797377) coding protein psRNATarget