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BaseInfo

ncRNA ID novel_gma_miR5602
Species Glycine max
Class miRNA
Genome position Chr5:14895835-14895923 [+]
Reference genome Glycine_max_v2.0
Source SRR835762
Length 24
Mature sequence(if miRNA) 1 - UUUCUUUGCUGCCUCAGACGUCAU - 24
Stem-loop(if miRNA) --     UUG  G  --       U   U   CCAAAUUUCUU    C   C
  UUUCU   CU CC  UCAGACG CAU UGA           GGUG AGG C
  |||||   || ||  ||||||| ||| |||           |||| |||
  GAAGG   GA GG  AGUCUGC GUG ACU           UCAC UUC U
UA     -UA  -  AU       U   C   -----------    C   U
Stem-loop sequence UUUCUUUGCUGCCUCAGACGUCAUUUGACCAAAUUUCUUGGUGCAGGCCUUCUUCCACUUCACGUGUCGUCUGAUAGGAGAUGGAAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014770986.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  ||||||||||||||||||||||||
targets:991   AUGACGUCUGAGGCAGCAAAGAAA   1014

0.0 PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X2, mRNA uncharacterized LOC106797154(LOC106797154) coding protein psRNATarget
XM_014770985.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  ||||||||||||||||||||||||
targets:1086   AUGACGUCUGAGGCAGCAAAGAAA   1109

0.0 PREDICTED: Glycine max uncharacterized LOC106797154 (LOC106797154), transcript variant X1, mRNA uncharacterized LOC106797154(LOC106797154) coding protein psRNATarget
XM_014776018.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:343   AUGACGUCUGAGGCAGCAAAGGAA   366

1.5 PREDICTED: Glycine max uncharacterized LOC106798841 (LOC106798841), mRNA uncharacterized LOC106798841(LOC106798841) coding protein psRNATarget
XM_014777033.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:457   AUGACGUCUGAGGCAGCAAAGGAA   480

1.5 PREDICTED: Glycine max uncharacterized LOC106799075 (LOC106799075), mRNA uncharacterized LOC106799075(LOC106799075) coding protein psRNATarget
XM_014770450.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:1   AUGACGUCUGAGGCAGCAAAGGAA   24

1.5 PREDICTED: Glycine max uncharacterized LOC106796841 (LOC106796841), mRNA uncharacterized LOC106796841(LOC106796841) coding protein psRNATarget
XM_014770488.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:1276   AUGACGUCUGAGGCAGCAAAGGAA   1299

1.5 PREDICTED: Glycine max uncharacterized LOC106796856 (LOC106796856), mRNA uncharacterized LOC106796856(LOC106796856) coding protein psRNATarget
XM_014773484.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:1324   AUGACGUCUGAGGCAGCAAAGGAA   1347

1.5 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X2, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773485.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:1413   AUGACGUCUGAGGCAGCAAAGGAA   1436

1.5 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X3, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_014773483.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||||||||||||||||||=||
targets:1820   AUGACGUCUGAGGCAGCAAAGGAA   1843

1.5 PREDICTED: Glycine max uncharacterized LOC102662694 (LOC102662694), transcript variant X1, mRNA uncharacterized LOC102662694(LOC102662694) coding protein psRNATarget
XM_003547409.3
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  ||||=||||||||||||||||=||
targets:522   AUGAUGUCUGAGGCAGCAAAGGAA   545

1.5 PREDICTED: Glycine max uncharacterized LOC100789246 (LOC100789246), transcript variant X1, mRNA uncharacterized LOC100789246(LOC100789246) coding protein psRNATarget
XM_014762422.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  ||||||*||||||||||||||=||
targets:755   AUGACGCCUGAGGCAGCAAAGGAA   778

2.5 PREDICTED: Glycine max uncharacterized LOC106794681 (LOC106794681), mRNA uncharacterized LOC106794681(LOC106794681) coding protein psRNATarget
XM_014761988.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:211   AUGACAUCUGAGGCAGCAAAGGAA   234

2.5 PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X1, mRNA uncharacterized LOC106794548(LOC106794548) coding protein psRNATarget
XM_014761990.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:211   AUGACAUCUGAGGCAGCAAAGGAA   234

2.5 PREDICTED: Glycine max uncharacterized LOC106794548 (LOC106794548), transcript variant X2, mRNA uncharacterized LOC106794548(LOC106794548) coding protein psRNATarget
XM_014771500.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:899   AUGACAUCUGAGGCAGCAAAGGAA   922

2.5 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X2, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014771499.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:899   AUGACAUCUGAGGCAGCAAAGGAA   922

2.5 PREDICTED: Glycine max uncharacterized LOC102662230 (LOC102662230), transcript variant X1, mRNA uncharacterized LOC102662230(LOC102662230) coding protein psRNATarget
XM_014770086.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:2229   AUGACAUCUGAGGCAGCAAAGGAA   2252

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X2, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770087.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:2229   AUGACAUCUGAGGCAGCAAAGGAA   2252

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X3, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770089.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:2142   AUGACAUCUGAGGCAGCAAAGGAA   2165

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X5, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770088.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:2149   AUGACAUCUGAGGCAGCAAAGGAA   2172

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X4, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770085.1
ncRNA:24   UACUGCAGACUCCGUCGUUUCUUU   1
  |||||*|||||||||||||||=||
targets:2229   AUGACAUCUGAGGCAGCAAAGGAA   2252

2.5 PREDICTED: Glycine max uncharacterized LOC102668239 (LOC102668239), transcript variant X1, mRNA uncharacterized LOC102668239(LOC102668239) coding protein psRNATarget
XM_014770569.1
ncRNA:24   UACUGCAGACUCCGUCGUUU-CUUU   1
  ||||||||||||||||||||-||||
targets:665   AUGACGUCUGAGGCAGCAAAAGAAA   689

3.0 PREDICTED: Glycine max uncharacterized LOC102664574 (LOC102664574), mRNA uncharacterized LOC102664574(LOC102664574) coding protein psRNATarget
XM_014774672.1
ncRNA:24   UACUGCAGACUCCGUCGUUU-CUUU   1
  ||||||||||||||||||||-||||
targets:956   AUGACGUCUGAGGCAGCAAAUGAAA   980

3.0 PREDICTED: Glycine max uncharacterized LOC102661438 (LOC102661438), mRNA uncharacterized LOC102661438(LOC102661438) coding protein psRNATarget
XM_014770570.1
ncRNA:24   UACUGCAGACUCCGUCGUUU-CUUU   1
  ||||||||||||||||||||-||||
targets:289   AUGACGUCUGAGGCAGCAAAAGAAA   313

3.0 PREDICTED: Glycine max uncharacterized LOC106796922 (LOC106796922), mRNA uncharacterized LOC106796922(LOC106796922) coding protein psRNATarget
XM_014763110.1
ncRNA:24   UACUGCAGACUCCGUCGUUU-CUUU   1
  ||||||||||||||||||||-||||
targets:812   AUGACGUCUGAGGCAGCAAAAGAAA   836

3.0 PREDICTED: Glycine max uncharacterized LOC106794980 (LOC106794980), mRNA uncharacterized LOC106794980(LOC106794980) coding protein psRNATarget
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