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BaseInfo

ncRNA ID	novel_gma_miR5598
Species	Glycine max
Class	miRNA
Genome position	Chr4:26883865-26883967 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835762;SRR835763;SRR835765;SRR835771;SRR835772;SRR835773
Length	21
Mature sequence(if miRNA)	83 - UGUACAUUCUAAGACGGUUAU - 103
Stem-loop(if miRNA)	--    C                      -C   CG          U   UC   UGUA AUUCUAAGACGGUUAUUACAAA  AAC  UCUUAGAAAG CUU  C   |||| ||||||||||||||||||||||  |||  |||||||||| |||  U   AUAU UAGGAUUCUGUCAAUAAUGUUU  UUG  AGAAUCUUUU GAA  U GC    A                      UA   AU          -   UA
Stem-loop sequence	UGUACAUUCUAAGACGGUUAUUACAAACAACCGUCUUAGAAAGUCUUUCCUUAUAAGUUUUCUAAGAUAGUUAUUUUGUAAUAACUGUCUUAGGAUAUAUACG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014771087.1	ncRNA:21   UAUUGGCAGAAUCUUACAUGU   1   |*|||||||||||||||||=| targets:2535   AAAACCGUCUUAGAAUGUAUA   2555 Target Full Sequence	1.5	PREDICTED: Glycine max uncharacterized LOC102664939 (LOC102664939), transcript variant X2, mRNA	uncharacterized LOC102664939(LOC102664939)	coding protein	psRNATarget
XM_014773514.1	ncRNA:21   UAUUGGCAGAAUCUUACAUGU   1   *|||||||||||||||||=|* targets:379   UUAACCGUCUUAGAAUGUGCU   399 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA	uncharacterized LOC106798042(LOC106798042)	coding protein	psRNATarget
XM_014764114.1	ncRNA:21   UAUUGGCAGAAUCUUACAU-GU   1   |||||||||||||||||||-|| targets:2003   AUAACCGUCUUAGAAUGUAACA   2024 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X6, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764113.1	ncRNA:21   UAUUGGCAGAAUCUUACAU-GU   1   |||||||||||||||||||-|| targets:2011   AUAACCGUCUUAGAAUGUAACA   2032 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X2, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_006591004.2	ncRNA:21   UAUUGGCAGAAUCUUACAU-GU   1   |||||||||||||||||||-|| targets:2067   AUAACCGUCUUAGAAUGUAACA   2088 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X5, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764112.1	ncRNA:21   UAUUGGCAGAAUCUUACAU-GU   1   |||||||||||||||||||-|| targets:2083   AUAACCGUCUUAGAAUGUAACA   2104 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X1, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget