ncRNA ID | novel_gma_miR5597 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr19:33987895-33988114 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR1295517 |
Length | 23 |
Mature sequence(if miRNA) | 198 - AACUUUGAUUGUGGGAGAGCAUU - 220 |
Stem-loop(if miRNA) |
--C    G       C             A AC              C    C    A              -----              G    U   A       CAAA    GCUC CUCACAA CAAAGUUGUUACA G  CUAUUUCUCUUGCU GUGU AACC GUUUGGUUAAUCAA     AUAACCUUGUUAUG AAUG GUU GAGUAUC    A    |||| ||||||| ||||||||||||| |  |||||||||||||| |||| |||| ||||||||||||||     |||||||||||||| |||| ||| |||||||    U    CGAG GGGUGUU GUUUCAACAAUGU C  GAUAAAGAGAACGA CACA UUGG CAAACCAAUUAGUU     UAUUGGAACGAUGU UUAC CAA CUCAUAG    G UUA    A       A             A CA              A    U    C              UCGUU              A    C   C       ACUA |
Stem-loop sequence | CGCUCGCUCACAACCAAAGUUGUUACAAGACCUAUUUCUCUUGCUCGUGUCAACCAGUUUGGUUAAUCAAAUAACCUUGUUAUGGAAUGUGUUAGAGUAUCCAAAAUGAUCAGAUACUCCAACCCAUUAUGUAGCAAGGUUAUUUGCUUUGAUUAACCAAACCGGUUUACACAAGCAAGAGAAAUAGACCAUGUAACAACUUUGAUUGUGGGAGAGCAUU |