Search result

BaseInfo

ncRNA ID novel_gma_miR5597
Species Glycine max
Class miRNA
Genome position Chr19:33987895-33988114 [+]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 23
Mature sequence(if miRNA) 198 - AACUUUGAUUGUGGGAGAGCAUU - 220
Stem-loop(if miRNA) --C    G       C             A AC              C    C    A              -----              G    U   A       CAAA
   GCUC CUCACAA CAAAGUUGUUACA G  CUAUUUCUCUUGCU GUGU AACC GUUUGGUUAAUCAA     AUAACCUUGUUAUG AAUG GUU GAGUAUC    A
   |||| ||||||| ||||||||||||| |  |||||||||||||| |||| |||| ||||||||||||||     |||||||||||||| |||| ||| |||||||    U
   CGAG GGGUGUU GUUUCAACAAUGU C  GAUAAAGAGAACGA CACA UUGG CAAACCAAUUAGUU     UAUUGGAACGAUGU UUAC CAA CUCAUAG    G
UUA    A       A             A CA              A    U    C              UCGUU              A    C   C       ACUA
Stem-loop sequence CGCUCGCUCACAACCAAAGUUGUUACAAGACCUAUUUCUCUUGCUCGUGUCAACCAGUUUGGUUAAUCAAAUAACCUUGUUAUGGAAUGUGUUAGAGUAUCCAAAAUGAUCAGAUACUCCAACCCAUUAUGUAGCAAGGUUAUUUGCUUUGAUUAACCAAACCGGUUUACACAAGCAAGAGAAAUAGACCAUGUAACAACUUUGAUUGUGGGAGAGCAUU