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BaseInfo

ncRNA ID novel_gma_miR5595
Species Glycine max
Class miRNA
Genome position Chr3:23494788-23494839 [+]
Reference genome Glycine_max_v2.0
Source SRR835762
Length 24
Mature sequence(if miRNA) 29 - AAAAGGCUGAAGGGGGUUGUUCUA - 52
Stem-loop(if miRNA) --C           - CC       C
   GGCAACCUCCU C  CCUUUUU C
   ||||||||||| |  ||||||| U
   UUGUUGGGGGA G  GGAAAAA A
AUC           A UC       U
Stem-loop sequence CGGCAACCUCCUCCCCCUUUUUCCUAUAAAAAGGCUGAAGGGGGUUGUUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014776877.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:705   UGCUGCAAUCUCCUUCAGCCUUUG   728

3.0 PREDICTED: Glycine max protein DETOXIFICATION 14-like (LOC100820234), transcript variant X2, mRNA protein DETOXIFICATION 14-like(LOC100820234) coding protein psRNATarget
XM_006602983.2
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:679   UGCUGCAAUCUCCUUCAGCCUUUG   702

3.0 PREDICTED: Glycine max protein DETOXIFICATION 14-like (LOC100808206), mRNA protein DETOXIFICATION 14-like(LOC100808206) coding protein psRNATarget
XM_003526327.3
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:706   UGCUGCAAUCUCCUUCAGCCUUUG   729

3.0 PREDICTED: Glycine max protein DETOXIFICATION 14-like (LOC100820234), transcript variant X1, mRNA protein DETOXIFICATION 14-like(LOC100820234) coding protein psRNATarget
BT096794.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:686   UGCCGCAAUCUCCUUCAGCCUUUG   709

3.0 Soybean clone JCVI-FLGm-21O7 unknown mRNA NA coding protein psRNATarget
XM_014766008.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:572   UGCCGCAAUCUCCUUCAGCCUUUG   595

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X11, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014766010.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:979   UGCCGCAAUCUCCUUCAGCCUUUG   1002

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X12, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765989.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:875   UGCCGCAAUCUCCUUCAGCCUUUG   898

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X3, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014766007.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:966   UGCCGCAAUCUCCUUCAGCCUUUG   989

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X10, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_003518588.3
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:973   UGCCGCAAUCUCCUUCAGCCUUUG   996

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X9, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014766002.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:974   UGCCGCAAUCUCCUUCAGCCUUUG   997

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X8, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765994.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:955   UGCCGCAAUCUCCUUCAGCCUUUG   978

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X5, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765985.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:961   UGCCGCAAUCUCCUUCAGCCUUUG   984

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X2, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014766000.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:976   UGCCGCAAUCUCCUUCAGCCUUUG   999

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X7, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765997.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:975   UGCCGCAAUCUCCUUCAGCCUUUG   998

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X6, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765992.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:999   UGCCGCAAUCUCCUUCAGCCUUUG   1022

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X4, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget
XM_014765982.1
ncRNA:24   AUCUUGUUGGGGGAAGUCGGAAAA   1
  |=**=|||=|=||||||||||||*
targets:1005   UGCCGCAAUCUCCUUCAGCCUUUG   1028

3.0 PREDICTED: Glycine max protein DETOXIFICATION 1 (LOC100776126), transcript variant X1, mRNA protein DETOXIFICATION 1(LOC100776126) coding protein psRNATarget