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BaseInfo

ncRNA ID novel_gma_miR5593
Species Glycine max
Class miRNA
Genome position Chr2:21118322-21118374 [-]
Reference genome Glycine_max_v2.0
Source SRR835762
Length 24
Mature sequence(if miRNA) 30 - AAGGAUAUCUGAACACAAGGGAAG - 53
Stem-loop(if miRNA) --      A       -   -     AG
  AAGGAU UCUGAAC ACA AGGGA  G
  |||||| ||||||| ||| |||||
  UUUUUG AGACUUG UGU UCCCU  G
AA      -       G   G     GU
Stem-loop sequence AAGGAUAUCUGAACACAAGGGAAGGGUGUCCCUGUGUGGUUCAGAGUUUUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003536618.3
ncRNA:24   GAAG-GGAACACAAGUCUAUAGGAA   1
  *|||-=|||*|*|||||||||||||
targets:999   GUUCAUCUUCUUUUCAGAUAUCCUU   1023

2.0 PREDICTED: Glycine max elongator complex protein 2-like (LOC100806450), mRNA elongator complex protein 2-like(LOC100806450) coding protein psRNATarget
BT092937.1
ncRNA:24   GAAGGGAACACAAGUCUAUAGGAA   1
  =||===||||||||||||*|||||
targets:434   UUUUUUUUGUGUUCAGAUUUCCUU   457

2.5 Soybean clone JCVI-FLGm-13E7 unknown mRNA NA coding protein psRNATarget