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BaseInfo

ncRNA ID novel_gma_miR5585
Species Glycine max
Class miRNA
Genome position Chr1:51438771-51438821 [-]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 24
Mature sequence(if miRNA) 28 - GUAAAAUCGUGUAAUGUUGGUCCC - 51
Stem-loop(if miRNA) --     AU   G    -  -     C
  GUAAA  CGU UAAU GU UGGUC C
  |||||  ||| |||| || ||||| U
  CAUUU  GCA GUUA CA ACCAG C
AC     --   G    A  C     A
Stem-loop sequence GUAAAAUCGUGUAAUGUUGGUCCCUCAGACCACACAAUUGGACGUUUACCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006602607.2
ncRNA:24   CCCUGGUUGUAAUGUGCUAAAAUG   1
  *|||=|||||||=|||||||||||
targets:733   AGGAUCAACAUUGCACGAUUUUAC   756

1.5 PREDICTED: Glycine max transcription factor TGA7-like (LOC100794752), mRNA transcription factor TGA7-like(LOC100794752) coding protein psRNATarget