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BaseInfo

ncRNA ID	novel_gma_miR5578
Species	Glycine max
Class	miRNA
Genome position	Chr19:4653651-4653830 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835762;SRR835763;SRR835765;SRR835771;SRR835773
Length	24
Mature sequence(if miRNA)	1 - UUGCACUAGAAGAAUCAGCACCAA - 24
Stem-loop(if miRNA)	--   C       GA                  C        C                     G     C    -GC        C      UUG ACUAGAA  AUCAGCACCAAUCUGUGC UCUUCCUC UCUACCAGCUCAAUAUCUUUC UUUCA CUUU   UUUGUAAA UACA   ||| |||||||  |||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| ||||   |||||||| |||C   AAC UGAUCUU  UAGUCGUGGUUAGACACG AGAAGGAG AGAUGGUCGAGUUAUAGAAAG AAAGU GAAA   AAACAUUU AUGU CC   C       GC                  A        C                     G     U    ACA        A
Stem-loop sequence	UUGCACUAGAAGAAUCAGCACCAAUCUGUGCCUCUUCCUCCUCUACCAGCUCAAUAUCUUUCGUUUCACCUUUGCUUUGUAAACUACACUGUAAUUUACAAAACAAAAGUUGAAAGGAAAGAUAUUGAGCUGGUAGACGAGGAAGAAGCACAGAUUGGUGCUGAUCGUUCUAGUCCAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006586135.2	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X2, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_014779469.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||||||*||||||||||| targets:833   UUGGUGCUGAUUGUUCUAGUGCAA   856 Target Full Sequence	1.5	PREDICTED: Glycine max SNF2 domain-containing protein CLASSY 3-like (LOC100806733), transcript variant X1, mRNA	SNF2 domain-containing protein CLASSY 3-like(LOC100806733)	coding protein	psRNATarget
XM_006591670.1	ncRNA:24   AACCACGACUAAGAAGAUCACGUU   1   ||||||||*|||*||||||||||| targets:89   UUGGUGCUAAUUGUUCUAGUGCAA   112 Target Full Sequence	2.5	PREDICTED: Glycine max glutathione gamma-glutamylcysteinyltransferase 3-like (LOC100778828), mRNA	glutathione gamma-glutamylcysteinyltransferase 3-like(LOC100778828)	coding protein	psRNATarget