ncRNA ID | novel_gma_miR5572 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr18:2912065-2912145 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835762 |
Length | 24 |
Mature sequence(if miRNA) | 58 - AAAUGCUUGUAUAUCUGACGGGAU - 81 |
Stem-loop(if miRNA) |
--    A   C  C     -A     UCUUUUCU  UAU   U   UCCG CAG AU UACAA  AUUUU        GC   GAG U   |||| ||| || |||||  |||||        ||   |||   GGGC GUC UA AUGUU  UAAAA        UG   CUC C UA    A   -  U     CG     -CUGUCUC  --U   U |
Stem-loop sequence | UCCGACAGCAUCUACAAAAUUUUUCUUUUCUGCUAUGAGUUCUCUCUGUCUCUGUCAAAAUGCUUGUAUAUCUGACGGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK287278.1 |
|
2.0 | Glycine max cDNA, clone: GMFL01-48-K12 | NA | coding protein | psRNATarget | |||||||||
XM_003536382.3 |
|
2.0 | PREDICTED: Glycine max protein FAM188A (LOC100813222), mRNA | protein FAM188A(LOC100813222) | coding protein | psRNATarget | |||||||||
XM_014765329.1 |
|
2.0 | PREDICTED: Glycine max uncharacterized LOC102669274 (LOC102669274), mRNA | uncharacterized LOC102669274(LOC102669274) | coding protein | psRNATarget |