ncRNA ID | novel_gma_miR5564 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr17:25436208-25436328 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835762;SRR835763;SRR835765;SRR835766;SRR835771;SRR835772;SRR835773 |
Length | 24 |
Mature sequence(if miRNA) | 98 - AGAAUGUAGACUUUCUAAGAUGGU - 121 |
Stem-loop(if miRNA) |
--    U  AG  U             C  CA                 G    UU    A   AGAA GU  AC UUCUAAGAUGGUU UC  GAGAAUCGUCUUAGAAU UCUU  UUUU A   |||| ||  || ||||||||||||| ||  ||||||||||||||||| ||||  ||||   UCUU CA  UG AAGAUUCUGCCAA AG  UUUUUAGCAGAAUCUUA GGAG  AAAA A AA    U  GA  U             A  AG                 -    UU    A |
Stem-loop sequence | AGAAUGUAGACUUUCUAAGAUGGUUCUCCAGAGAAUCGUCUUAGAAUGUCUUUUUUUUAAAAAAAAUUGAGGAUUCUAAGACGAUUUUUGAGAAAACCGUCUUAGAAUGUAGACUUUCUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_014763883.1 |
|
3.0 | PREDICTED: Glycine max isoflavone reductase-like protein (LOC100780246), mRNA | isoflavone reductase-like protein(LOC100780246) | coding protein | psRNATarget | |||||||||
XM_014778089.1 |
|
3.0 | PREDICTED: Glycine max uncharacterized LOC102664995 (LOC102664995), mRNA | uncharacterized LOC102664995(LOC102664995) | coding protein | psRNATarget |