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BaseInfo

ncRNA ID novel_gma_miR5564
Species Glycine max
Class miRNA
Genome position Chr17:25436208-25436328 [-]
Reference genome Glycine_max_v2.0
Source SRR835762;SRR835763;SRR835765;SRR835766;SRR835771;SRR835772;SRR835773
Length 24
Mature sequence(if miRNA) 98 - AGAAUGUAGACUUUCUAAGAUGGU - 121
Stem-loop(if miRNA) --    U  AG  U             C  CA                 G    UU    A
  AGAA GU  AC UUCUAAGAUGGUU UC  GAGAAUCGUCUUAGAAU UCUU  UUUU A
  |||| ||  || ||||||||||||| ||  ||||||||||||||||| ||||  ||||
  UCUU CA  UG AAGAUUCUGCCAA AG  UUUUUAGCAGAAUCUUA GGAG  AAAA A
AA    U  GA  U             A  AG                 -    UU    A
Stem-loop sequence AGAAUGUAGACUUUCUAAGAUGGUUCUCCAGAGAAUCGUCUUAGAAUGUCUUUUUUUUAAAAAAAAUUGAGGAUUCUAAGACGAUUUUUGAGAAAACCGUCUUAGAAUGUAGACUUUCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_014763883.1
ncRNA:24   UGGUAGAA-UCUUUCAGAUGUAAGA   1
  |||--|||-|||||||||||||||*
targets:798   ACC--CUUGAGAAAGUCUACAUUCC   820

3.0 PREDICTED: Glycine max isoflavone reductase-like protein (LOC100780246), mRNA isoflavone reductase-like protein(LOC100780246) coding protein psRNATarget
XM_014778089.1
ncRNA:24   UGGUAGAAUCUUUCAGAUGUAAGA   1
  ***||=*||||||||||||||||*
targets:245   UGGAUUCUAGAAAGUCUACAUUCG   268

3.0 PREDICTED: Glycine max uncharacterized LOC102664995 (LOC102664995), mRNA uncharacterized LOC102664995(LOC102664995) coding protein psRNATarget