ncRNA ID | novel_gma_miR5561 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr10:38315738-38315823 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835762;SRR835765;SRR835770 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCUACCGGAAGAACCUUUUUC - 21 |
Stem-loop(if miRNA) |
--                       A      UA        A   AGAAGGUUCUUCCGGUAGAACAA UUGUUU  CCGGAAGA G   ||||||||||||||||||||||| ||||||  ||||||||   UUUUCCAAGAAGGCCAUCUUGUU AACAAG  GGCUUUCU G CU                       A      UA        U |
Stem-loop sequence | AGAAGGUUCUUCCGGUAGAACAAAUUGUUUUACCGGAAGAAGGUUCUUUCGGAUGAACAAAUUGUUCUACCGGAAGAACCUUUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_006583583.2 |
|
3.0 | PREDICTED: Glycine max cell wall protein RBR3-like (LOC100817222), transcript variant X1, mRNA | cell wall protein RBR3-like(LOC100817222) | coding protein | psRNATarget | |||||||||
XM_014778015.1 |
|
3.0 | PREDICTED: Glycine max cell wall protein RBR3-like (LOC100817222), transcript variant X2, mRNA | cell wall protein RBR3-like(LOC100817222) | coding protein | psRNATarget |