| ncRNA ID | novel_gma_miR5558 |
| Species | Glycine max |
| Class | miRNA |
| Genome position | Chr16:33554609-33554780 [+] |
| Reference genome | Glycine_max_v2.0 |
| Source | SRR835762 |
| Length | 24 |
| Mature sequence(if miRNA) | 149 - UGGAUUUGGAGAGAGAAUAACGGA - 172 |
| Stem-loop(if miRNA) |
--CU G U --UU GAA CUUUUGAAGGAUAUCUUAAUUUUUGGCAGAAAAAAUCUGGAUUAUAGGUGC UUAUUCUCUU UUA AUCUA UGAG CA C |||||||||| ||| ||||| |||| || AAUAAGAGAG GGU UAGGU ACUC CU A AGGC A U UGAC --A ACGGAAGAGUGGAAGUUUUCACGGAGAAACGUAAAAAAGUGUAGUUGUUCG |
| Stem-loop sequence | CUUUAUUCUCUUGUUAUAUCUAUUUGAGGAACACUUUUGAAGGAUAUCUUAAUUUUUGGCAGAAAAAAUCUGGAUUAUAGGUGCCAGCUUGUUGAUGUGAAAAAAUGCAAAGAGGCACUUUUGAAGGUGAGAAGGCAUCACUCACAGUUGGAUUUGGAGAGAGAAUAACGGA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_003534130.3 |
|
2.5 | PREDICTED: Glycine max protein ASPARTIC PROTEASE IN GUARD CELL 1 (LOC100784849), mRNA | protein ASPARTIC PROTEASE IN GUARD CELL 1(LOC100784849) | coding protein | psRNATarget | |||||||||
| XM_006596638.2 |
|
2.5 | PREDICTED: Glycine max arogenate dehydrogenase 1, chloroplastic-like (LOC100803165), mRNA | arogenate dehydrogenase 1, chloroplastic-like(LOC100803165) | coding protein | psRNATarget |