Search result

BaseInfo

ncRNA ID	novel_gma_miR5557
Species	Glycine max
Class	miRNA
Genome position	Chr16:29052878-29052968 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835762;SRR835763;SRR835767;SRR835771
Length	24
Mature sequence(if miRNA)	68 - AGAAGGUUCUUUCGGUAGAACAAA - 91
Stem-loop(if miRNA)	--                        C             A   A   UGUUCUAUCGGAAGAACCUUCUUC GGAGAAGUUAUCG AAG A   |||||||||||||||||||||||| ||||||||||||| ||| C   ACAAGAUGGCUUUCUUGGAAGAAG CCUCUUCGAUGGC UUC U AA                        A             C   U
Stem-loop sequence	UGUUCUAUCGGAAGAACCUUCUUCCGGAGAAGUUAUCGAAAGAACUUCUUCCGGUAGCUUCUCCAGAAGAAGGUUCUUUCGGUAGAACAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT089703.1	ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1   ||||-||**||=||||||||||||| targets:480   UUUGCUUAGACUGAAAGAACCUUCU   504 Target Full Sequence	3.0	Soybean clone JCVI-FLGm-2L11 unknown mRNA	NA	coding protein	psRNATarget
AK246037.1	ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1   ||||-||**||=||||||||||||| targets:414   UUUGCUUAGACUGAAAGAACCUUCU   438 Target Full Sequence	3.0	Glycine max cDNA, clone: GMFL01-49-H03	NA	coding protein	psRNATarget
XM_006584679.2	ncRNA:24   AAAC-AAGAUGGCUUUCUUGGAAGA   1   ||||-||**||=||||||||||||| targets:490   UUUGCUUAGACUGAAAGAACCUUCU   514 Target Full Sequence	3.0	PREDICTED: Glycine max V-type proton ATPase subunit E-like (LOC106794127), mRNA	V-type proton ATPase subunit E-like(LOC106794127)	coding protein	psRNATarget