ncRNA ID | novel_gma_miR5548 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr14:45108975-45109139 [-] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835762 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGUUGCGAUAUUAGUCCAGUGGU - 23 |
Stem-loop(if miRNA) |
--G    U   --       AU    -----------------G    U U G    AG       G  G  G --------A  G    G     AC    GCUG GAU  AUGUCGU  GACU                  UGCG G C CGUG  UGCGUGU GA AA A         AU UUUU CUUCA  C    |||| |||  |||||||  ||||                  |||| | | ||||  ||||||| || || |         || |||| |||||    UGAC CUG  UAUAGCG  UUGA                  GUGC C G GUAC  ACGUACG UU UU U         UA AAAA GAGGU  G UGG    -   AU       --    AAAGAAAGAAGAAGAGAA    - U A    CA       A  G  G GAAGAAGAG  G    A     GU |
Stem-loop sequence | GGCUGUGAUAUGUCGUAUGACUGUGCGUGUCGCGUGAGUGCGUGUGGAGAAGAAAUGUUUUGCUUCAACCGUGUGGAGAAAAAGAUGAGAAGAAGUGUUGUUAGCAUGCAACCAUGAGUCCGUGAAGAGAAGAAGAAAGAAAAGUUGCGAUAUUAGUCCAGUGGU |