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BaseInfo

ncRNA ID novel_gma_miR5548
Species Glycine max
Class miRNA
Genome position Chr14:45108975-45109139 [-]
Reference genome Glycine_max_v2.0
Source SRR835762
Length 23
Mature sequence(if miRNA) 1 - AGUUGCGAUAUUAGUCCAGUGGU - 23
Stem-loop(if miRNA) --G    U   --       AU    -----------------G    U U G    AG       G  G  G --------A  G    G     AC
   GCUG GAU  AUGUCGU  GACU                  UGCG G C CGUG  UGCGUGU GA AA A         AU UUUU CUUCA  C
   |||| |||  |||||||  ||||                  |||| | | ||||  ||||||| || || |         || |||| |||||
   UGAC CUG  UAUAGCG  UUGA                  GUGC C G GUAC  ACGUACG UU UU U         UA AAAA GAGGU  G
UGG    -   AU       --    AAAGAAAGAAGAAGAGAA    - U A    CA       A  G  G GAAGAAGAG  G    A     GU
Stem-loop sequence GGCUGUGAUAUGUCGUAUGACUGUGCGUGUCGCGUGAGUGCGUGUGGAGAAGAAAUGUUUUGCUUCAACCGUGUGGAGAAAAAGAUGAGAAGAAGUGUUGUUAGCAUGCAACCAUGAGUCCGUGAAGAGAAGAAGAAAGAAAAGUUGCGAUAUUAGUCCAGUGGU