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BaseInfo

ncRNA ID novel_gma_miR5545
Species Glycine max
Class miRNA
Genome position Chr14:42148483-42148658 [+]
Reference genome Glycine_max_v2.0
Source SRR835762
Length 18
Mature sequence(if miRNA) 159 - AUCUAUGAUCUGAUUGUU - 176
Stem-loop(if miRNA) --      A   U   U    A    AAG         AAUAAGC  UAGUGGAAUGAAUAUAUCUUGAGUUAUGAAUUAUGGUUAUAUCU
  CAAUCA AUC AUA AUGC UUGU   UUCAAGAAG       AC                                            A
  |||||| ||| ||| |||| ||||   |||||||||       ||                                            U
  GUUAGU UAG UAU UAUG GACG   AAGUUUUUU       AG                                            U
UU      C   -   C    A    ---         ---AAUU  UCUAGUAUCUAUGAUUUGUUUAGUUGUUCCCUUCUUAACUUGUU
Stem-loop sequence CAAUCAAAUCUAUAUAUGCAUUGUAAGUUCAAGAAGAAUAAGCACUAGUGGAAUGAAUAUAUCUUGAGUUAUGAAUUAUGGUUAUAUCUAUUUUGUUCAAUUCUUCCCUUGUUGAUUUGUUUAGUAUCUAUGAUCUGAUUAAUUUUUUGAAGCAGAGUAUCUAUGAUCUGAUUGUU