ncRNA ID | novel_gma_miR5540 |
Species | Glycine max |
Class | miRNA |
Genome position | Chr13:667713-667840 [+] |
Reference genome | Glycine_max_v2.0 |
Source | SRR835762;SRR835765;SRR835771 |
Length | 24 |
Mature sequence(if miRNA) | 105 - UGUAACUACAACUGUGGAAGACAA - 128 |
Stem-loop(if miRNA) |
--U        U              U        C         C      GC  A      A    UCUUCCGC GUUGUAGUUACAAC GCGGAAGA AGCUUCUUU GUGGAA  UC CGGAAG U    |||||||| |||||||||||||| |||||||| ||||||||| ||||||  || ||||||    AGAAGGUG CAACAUCAAUGUUG CGCCUUCU UUGAAGAAA CACCUU  AG GCUUUC G AAC        U              U        U         A      AC  C      U |
Stem-loop sequence | UUCUUCCGCUGUUGUAGUUACAACUGCGGAAGACAGCUUCUUUCGUGGAAGCUCACGGAAGAUGUCUUUCGCGACAUUCCACAAAAGAAGUUUUCUUCCGCUGUUGUAACUACAACUGUGGAAGACAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT094659.1 |
|
2.5 | Soybean clone JCVI-FLGm-5N10 unknown mRNA | NA | coding protein | psRNATarget |