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BaseInfo

ncRNA ID novel_gma_miR5540
Species Glycine max
Class miRNA
Genome position Chr13:667713-667840 [+]
Reference genome Glycine_max_v2.0
Source SRR835762;SRR835765;SRR835771
Length 24
Mature sequence(if miRNA) 105 - UGUAACUACAACUGUGGAAGACAA - 128
Stem-loop(if miRNA) --U        U              U        C         C      GC  A      A
   UCUUCCGC GUUGUAGUUACAAC GCGGAAGA AGCUUCUUU GUGGAA  UC CGGAAG U
   |||||||| |||||||||||||| |||||||| ||||||||| ||||||  || ||||||
   AGAAGGUG CAACAUCAAUGUUG CGCCUUCU UUGAAGAAA CACCUU  AG GCUUUC G
AAC        U              U        U         A      AC  C      U
Stem-loop sequence UUCUUCCGCUGUUGUAGUUACAACUGCGGAAGACAGCUUCUUUCGUGGAAGCUCACGGAAGAUGUCUUUCGCGACAUUCCACAAAAGAAGUUUUCUUCCGCUGUUGUAACUACAACUGUGGAAGACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT094659.1
ncRNA:24   AACAGAAGGUGUCAACAUCAAUGU   1
  ***|=|||||=||||||||||*||
targets:635   GGCUUUUCCAUAGUUGUAGUUCCA   658

2.5 Soybean clone JCVI-FLGm-5N10 unknown mRNA NA coding protein psRNATarget