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BaseInfo

ncRNA ID novel_gma_miR5539
Species Glycine max
Class miRNA
Genome position Chr10:48548518-48548659 [+]
Reference genome Glycine_max_v2.0
Source SRR1295517
Length 24
Mature sequence(if miRNA) 119 - AGGGAUGAUUGAUUUUAACGGAAA - 142
Stem-loop(if miRNA) --   A                                  A          AU  A     UUUCAUUUAA
  UCC UUAAAAUCAAUCAUCCCUAAUUUAACUACAAUCA UUACAAUCGU  UU AUUUU          U
  ||| |||||||||||||||||||||||||||||||||| ||||||||||  || |||||
  AGG AAUUUUAGUUAGUAGGGAUUAAAUUGAUGUUAGU AAUGUUAGUA  AA UAAAA          U
AA   C                                  G          AC  C     UUACCUUUUU
Stem-loop sequence UCCAUUAAAAUCAAUCAUCCCUAAUUUAACUACAAUCAAUUACAAUCGUAUUUAAUUUUUUUCAUUUAAUUUUUUUCCAUUAAAAUCAACAAUGAUUGUAAGUGAUUGUAGUUAAAUUAGGGAUGAUUGAUUUUAACGGAAA