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BaseInfo

ncRNA ID	novel_gma_miR5538
Species	Glycine max
Class	miRNA
Genome position	Chr12:20152190-20152285 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835762;SRR835765;SRR835766;SRR835767
Length	24
Mature sequence(if miRNA)	73 - UGUACAUUCUAAGACGGUUCUCAA - 96
Stem-loop(if miRNA)	--    -- A               CAACUA               AGC   UGUA  C UUCUAAGACGGUUCU      AGAAUUGUCUUAGAA   G   ||||  | |||||||||||||||      |||||||||||||||   ACAU  G AAGAUUCUGUCAAGA      UCUUAGCAGAAUCUU   U AC    AC A               AUCAAC               ACA
Stem-loop sequence	UGUACAUUCUAAGACGGUUCUCAACUAAGAAUUGUCUUAGAAAGCGUACAUUCUAAGACGAUUCUCAACUAAGAACUGUCUUAGAAAGCAUACACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014773514.1	ncRNA:24   AACUCUUGGCAGAAUCUUACAUGU   1   ||---||||||||||||||||=|* targets:379   UU---AACCGUCUUAGAAUGUGCU   399 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC106798042 (LOC106798042), transcript variant X1, mRNA	uncharacterized LOC106798042(LOC106798042)	coding protein	psRNATarget
XM_014764114.1	ncRNA:24   AACUCUUGGCAGAAUCUUACAU-GU   1   ||*|*|||||||||||||||||-|| targets:2000   UUUAUAACCGUCUUAGAAUGUAACA   2024 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X6, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764113.1	ncRNA:24   AACUCUUGGCAGAAUCUUACAU-GU   1   ||*|*|||||||||||||||||-|| targets:2008   UUUAUAACCGUCUUAGAAUGUAACA   2032 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X2, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_006591004.2	ncRNA:24   AACUCUUGGCAGAAUCUUACAU-GU   1   ||*|*|||||||||||||||||-|| targets:2064   UUUAUAACCGUCUUAGAAUGUAACA   2088 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X5, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget
XM_014764112.1	ncRNA:24   AACUCUUGGCAGAAUCUUACAU-GU   1   ||*|*|||||||||||||||||-|| targets:2080   UUUAUAACCGUCUUAGAAUGUAACA   2104 Target Full Sequence	3.0	PREDICTED: Glycine max somatic embryogenesis receptor kinase 1-like (LOC100777573), transcript variant X1, mRNA	somatic embryogenesis receptor kinase 1-like(LOC100777573)	coding protein	psRNATarget