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BaseInfo

ncRNA ID	novel_gma_miR5533
Species	Glycine max
Class	miRNA
Genome position	Chr9:37249826-37249876 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835762
Length	24
Mature sequence(if miRNA)	28 - UUUCUUUUGUUUUGGACAGGCUGG - 51
Stem-loop(if miRNA)	--          UUU      GC   U   UUUCUUUUGU   GGACAG  UGG A   ||||||||||   ||||||  |||   AAGGAAGACA   CUUGUU  ACC A CC          ---      AA   G
Stem-loop sequence	UUUCUUUUGUUUUGGACAGGCUGGUAAGCCAAAUUGUUCACAGAAGGAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_006573163.2	ncRNA:24   GGUCGGACAGGUUUUGUUUUCUUU   1   |==*==|||||||*|||||||||| targets:1320   CUGUUUUGUCCAAUACAAAAGAAA   1343 Target Full Sequence	2.5	PREDICTED: Glycine max GPI ethanolamine phosphate transferase 1 (LOC100800363), transcript variant X1, mRNA	GPI ethanolamine phosphate transferase 1(LOC100800363)	coding protein	psRNATarget
XM_006573164.2	ncRNA:24   GGUCGGACAGGUUUUGUUUUCUUU   1   |==*==|||||||*|||||||||| targets:1320   CUGUUUUGUCCAAUACAAAAGAAA   1343 Target Full Sequence	2.5	PREDICTED: Glycine max GPI ethanolamine phosphate transferase 1 (LOC100800363), transcript variant X2, mRNA	GPI ethanolamine phosphate transferase 1(LOC100800363)	coding protein	psRNATarget
XM_006601370.2	ncRNA:24   GGUCGGACAGGUUUUGUUUUCUUU   1   *||*|||*||||||||||||*||| targets:35   GCACCCUCUCCAAAACAAAACAAA   58 Target Full Sequence	2.5	PREDICTED: Glycine max probable receptor-like protein kinase At5g61350 (LOC100814982), mRNA	probable receptor-like protein kinase At5g61350(LOC100814982)	coding protein	psRNATarget