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BaseInfo

ncRNA ID	novel_gma_miR5526
Species	Glycine max
Class	miRNA
Genome position	Chr8:43954897-43955043 [+]
Reference genome	Glycine_max_v2.0
Source	SRR835761;SRR1451612
Length	21
Mature sequence(if miRNA)	1 - UAUGAAGCACGGACACCCCAG - 21
Stem-loop(if miRNA)	--               CCCCA CC    CCA   -CCU       U ACC      GACA   ACACCCGUACCGGA   UAUGAAGCACGGACA     G  CACC   GCC    UGCAGUG C   GACACC    CCG              U   |||||||||||||||     |  ||||   |||    ||||||| |   ||||||    |||              U   AUACUUCGUGCCUGU     C  GUGG   CGG    GUGUCAC G   CUGUGG    CAG              G UC               ----A CU    --C   UACU       U CAC      ---A   UUUGUAUAGUUUGA
Stem-loop sequence	UAUGAAGCACGGACACCCCAGCCCACCCCAGCCCCUUGCAGUGUCACCGACACCGACACCGACACCCGUACCGGAUUGAGUUUGAUAUGUUUGACAGGUGUCCACGUCACUGUGUCAUGGCCGGUGUCCAUGUCCGUGCUUCAUACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK287415.1	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||||||||||||||||||||| targets:925   CUGGGGUGUCCGUGCUUCAUA   945 Target Full Sequence	0.0	Glycine max cDNA, clone: GMFL01-52-N04	NA	coding protein	psRNATarget
XM_014762143.1	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||||*|||||||||||||||| targets:1025   CUGGAGUGUCCGUGCUUCAUA   1045 Target Full Sequence	1.0	PREDICTED: Glycine max tripeptidyl-peptidase 2-like (LOC100783061), transcript variant X2, mRNA	tripeptidyl-peptidase 2-like(LOC100783061)	coding protein	psRNATarget
XM_014762142.1	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||||*|||||||||||||||| targets:1263   CUGGAGUGUCCGUGCUUCAUA   1283 Target Full Sequence	1.0	PREDICTED: Glycine max tripeptidyl-peptidase 2-like (LOC100783061), transcript variant X1, mRNA	tripeptidyl-peptidase 2-like(LOC100783061)	coding protein	psRNATarget
XM_006605697.2	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||||*|||||||||||||||| targets:2523   CUGGAGUGUCCGUGCUUCAUA   2543 Target Full Sequence	1.0	PREDICTED: Glycine max uncharacterized LOC102669551 (LOC102669551), mRNA	uncharacterized LOC102669551(LOC102669551)	coding protein	psRNATarget
XM_006576236.2	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||*|*|||||||||||||||| targets:221   CUAGAGUGUCCGUGCUUCAUA   241 Target Full Sequence	2.0	PREDICTED: Glycine max NADPH-dependent pterin aldehyde reductase (LOC100801127), transcript variant X2, mRNA	NADPH-dependent pterin aldehyde reductase(LOC100801127)	coding protein	psRNATarget
XM_003520873.3	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   ||*|*|||||||||||||||| targets:219   CUAGAGUGUCCGUGCUUCAUA   239 Target Full Sequence	2.0	PREDICTED: Glycine max NADPH-dependent pterin aldehyde reductase (LOC100801127), transcript variant X1, mRNA	NADPH-dependent pterin aldehyde reductase(LOC100801127)	coding protein	psRNATarget
XM_014777250.1	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   **|*|||||||||||||*||| targets:231   GAGAGGUGUCCGUGCUUGAUA   251 Target Full Sequence	2.5	PREDICTED: Glycine max F-box-like/WD repeat-containing protein TBL1XR1 (LOC100792917), transcript variant X6, mRNA	F-box-like/WD repeat-containing protein TBL1XR1(LOC100792917)	coding protein	psRNATarget
XM_014777249.1	ncRNA:21   GACCCCACAGGCACGAAGUAU   1   **|*|||||||||||||*||| targets:231   GAGAGGUGUCCGUGCUUGAUA   251 Target Full Sequence	2.5	PREDICTED: Glycine max F-box-like/WD repeat-containing protein TBL1XR1 (LOC100792917), transcript variant X5, mRNA	F-box-like/WD repeat-containing protein TBL1XR1(LOC100792917)	coding protein	psRNATarget