Search result

BaseInfo

ncRNA ID novel_gma_miR5524
Species Glycine max
Class miRNA
Genome position Chr8:26617820-26617865 [+]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 22
Mature sequence(if miRNA) 25 - UUAGUGGUAGGAUUUUCUGGAC - 46
Stem-loop(if miRNA) --        ---G       U  A
  UCAGAAGA    ACCAUUA AG C
  ||||||||    ||||||| ||
  GGUCUUUU    UGGUGAU UC A
CA        AGGA       -  U
Stem-loop sequence UCAGAAGAGACCAUUAUAGACAUCUUAGUGGUAGGAUUUUCUGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_006596777.1
ncRNA:22   CAGGUCUUUUAGGAUGGUGAUU   1
  *|=|||||=|||||*|||||||
targets:100   AUUCAGAAGAUCCUUCCACUAA   121

2.5 PREDICTED: Glycine max uncharacterized LOC102666655 (LOC102666655), mRNA uncharacterized LOC102666655(LOC102666655) coding protein psRNATarget
XM_006598336.1
ncRNA:22   CAGGUCUUUUAGGAUGGUGAUU   1
  *|=||||=|||||||||||*||
targets:28   AUUCAGAGAAUCCUACCACAAA   49

2.5 PREDICTED: Glycine max uncharacterized LOC102659789 (LOC102659789), mRNA uncharacterized LOC102659789(LOC102659789) coding protein psRNATarget