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BaseInfo

ncRNA ID	novel_gma_miR5517
Species	Glycine max
Class	miRNA
Genome position	Chr1:22864113-22864319 [-]
Reference genome	Glycine_max_v2.0
Source	SRR835761
Length	21
Mature sequence(if miRNA)	1 - UUUUUCAAGCUAAGAACAAUU - 21
Stem-loop(if miRNA)	--                     A     U  CG      G C   A     A          UCU                           --AUAUU     U   UUGUUCUUAGCUUGAAAAAUA UGAUG UG  GUGGAU A GAG ACCAA UUGUUCUUCU   UAGUUCUUUGCCGAGAGCUUAUGAAAA       GAUGU G   ||||||||||||||||||||| ||||| ||  |||||| | ||| ||||| ||||||||||   |||||||||||||||||||||||||||       |||||   AACAAGAAUCGAACUUUUUAU ACUAC AC  CACCUA U CUC UGGUU GACAAGAAGA   AUCAAGAAACGGCUCUCGAAUACUUUU       CUGUA U UU                     A     U  AU      G A   C     C          ---                           AAAACAU     G
Stem-loop sequence	UUGUUCUUAGCUUGAAAAAUAAUGAUGUUGCGGUGGAUGACGAGAACCAAAUUGUUCUUCUUCUUAGUUCUUUGCCGAGAGCUUAUGAAAAAUAUUGAUGUUGUGAUGUCUACAAAAUUUUCAUAAGCUCUCGGCAAAGAACUAAGAAGAACAGCUUGGUCCUCAUGAUCCACUACAUCAUCAAUAUUUUUCAAGCUAAGAACAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_014765066.1	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1535   UUUUGUUUUCAGCUUGAAAAA   1555 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X6, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget
XM_006592803.2	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1687   UUUUGUUUUCAGCUUGAAAAA   1707 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X5, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget
XM_003540346.3	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1695   UUUUGUUUUCAGCUUGAAAAA   1715 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X4, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget
XM_014765065.1	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1699   UUUUGUUUUCAGCUUGAAAAA   1719 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X3, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget
XM_014765063.1	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1707   UUUUGUUUUCAGCUUGAAAAA   1727 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X1, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget
XM_014765064.1	ncRNA:21   UUAACAAGAAUCGAACUUUUU   1   **|||||=|*||||||||||| targets:1884   UUUUGUUUUCAGCUUGAAAAA   1904 Target Full Sequence	2.5	PREDICTED: Glycine max uncharacterized LOC100798869 (LOC100798869), transcript variant X2, mRNA	uncharacterized LOC100798869(LOC100798869)	coding protein	psRNATarget