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BaseInfo

ncRNA ID novel_gma_miR5514
Species Glycine max
Class miRNA
Genome position Chr5:27812359-27812448 [-]
Reference genome Glycine_max_v2.0
Source SRR835761
Length 21
Mature sequence(if miRNA) 70 - UAAAAGAGGAUAUAAAUAAUU - 90
Stem-loop(if miRNA) --                          A    C    UCAAAAA
  UAAAAGAGGAUAUAAAUAAUUUCAGA UUAG AAUU       C
  |||||||||||||||||||||||||| |||| ||||
  AUUUUCUCCUAUAUUUAUUAAAGUCU AAUC UUAG       U
GG                          C    A    UAUUACG
Stem-loop sequence UAAAAGAGGAUAUAAAUAAUUUCAGAAUUAGCAAUUUCAAAAACUGCAUUAUGAUUACUAACUCUGAAAUUAUUUAUAUCCUCUUUUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_003540786.3
ncRNA:21   UUAAUAAAUAUAGGAGAAAAU   1
  *|||*|||||||=||||||||
targets:61   CAUUCUUUAUAUUCUCUUUUA   81

2.5 PREDICTED: Glycine max probable WRKY transcription factor 31 (LOC100797998), mRNA probable WRKY transcription factor 31(LOC100797998) coding protein psRNATarget